Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
TGCT rs72754922 chr5:42547714 G/A 9.44E-5 132 37.95 52.43 20.23 KM Plot
TGCT rs72780141 chr16:27808472 T/G 1.04E-5 133 46.53 33.55 17.27 KM Plot
TGCT rs72780144 chr16:27809318 A/G 1.15E-5 132 46.3 33.55 17.27 KM Plot
TGCT rs72780146 chr16:27809888 G/A 1.15E-5 132 46.3 33.55 17.27 KM Plot
TGCT rs72780157 chr16:27815518 G/A 1.28E-5 130 45.7 38.2 17.27 KM Plot
TGCT rs72973380 chr3:125631030 G/C 2.41E-5 131 51.67 35.37 52.43 KM Plot
TGCT rs7297785 chr12:107041456 G/T 3.36E-8 134 27.93 38.2 48.87 KM Plot
TGCT rs73017232 chr3:10059664 T/C 2.38E-5 129 41.27 60.73 22.98 KM Plot
TGCT rs7309351 chr12:107077432 C/T 5.07E-5 134 28.67 45.1 46.77 KM Plot
TGCT rs73128366 chr4:37241908 T/C 0 133 45.83 31.75 0.5 KM Plot
TGCT rs73128373 chr4:37244986 G/C 0 133 45.83 31.75 0.5 KM Plot
TGCT rs73128374 chr4:37245463 C/T 0 133 45.83 31.75 0.5 KM Plot
TGCT rs73138870 chr20:58151064 T/G 2.81E-13 131 41.33 59.3 17.1 KM Plot
TGCT rs73138871 chr20:58151894 C/T 3.62E-13 130 42.18 76.63 17.1 KM Plot
TGCT rs73138883 chr20:58155307 G/A 3.92E-13 129 43.68 42.03 17.1 KM Plot